Bacterioplankton – 06 References

Representative Freshwater Bacterioplankton Isolated from Crater Lake, Oregon

Kathleen A. Page, Stephanie A. Connon, and Stephen J. Giovannoni

References

1. Achenbach, L. A., J. Carey, and M. T. Madigan. 2001. Photosynthetic and phylogenetic primers for detection of anoxygenic phototrophs in natural environments. Appl. Environ. Microbiol. 67:2922–2926.

2. Beja, O., M. T. Suzuki, et al. 2002. Unsuspected diversity among marine aerobic anoxygenic phototrophs. Nature 415:630–633.

3. Bruns, A., U. Nu¨bel, H. Cypionka, and J. Overmann. 2003. Effect of signal compounds and incubation conditions on the culturability of freshwater bacterioplankton. Appl. Environ. Microbiol. 69:1980–1989.

4. Burkert, U., F. Warnecke, D. Babenzien, E. Zwirnmann, and J. Pernthaler. 2003. Members of a readily enriched -proteobacterial clade are common in the surface waters of a humic lake. Appl. Environ. Microbiol. 69:6550–6559.

5. Bussmann, I., B. Philipp, and B. Schink. 2001. Factors influencing the cultivability of lake water bacteria. J. Microbiol. Methods 47:41–50.

6. Button, D. K., F. Schut, P. Quang, R. Martin, and B. R. Robertson. 1993. Viability and isolation of marine bacteria by dilution culture: theory, procedures, and initial results. Appl. Environ. Microbiol. 64:4467–4476.

7. Connon, S. A., and S. J. Giovannoni. 2002. High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates. Appl. Environ. Microbiol. 68:3878–3885.

8. Delorme, S., P. Lemanceau, R. Christen, T. Corberand, J. M. Meyer, and L. Gardan. 2002. Pseudomonas lini sp. nov., a novel species from bulk and rhizospheric soils. Int. J. Syst. Evol. Microbiol. 52:513–523.

9. Ding, L., and A. Yokota. 2002. Phylogenetic analysis of the genus Aquaspirillum based on 16S rRNA gene sequences. FEMS Microbiol. Lett. 212:165–169.

10. Finneran, K. T., C. V. Johnsen, and D. R. Lovley. 2003. Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III). Int. J. Syst. Evol. Microbiol. 53:669–673.

11. Glockner, F. O., B. M. Fuchs, and R. Amann. 1999. Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization. Appl. Environ. Microbiol. 65:3721–3726.

12. Glockner, F. O., E. Zaichikov, N. Belkova, L. Denissova, J. Pernthaler, A. Pernthaler, and R. Amann. 2000. Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria. Appl. Environ. Microbiol. 66:5053–5065.

13. Godfrey, S. A., S. A. Harrow, J. W. Marshall, and J. D. Klena. 2001. Characterization by 16S rRNA sequence analysis of pseudomonads causing blotch disease of cultivated Agaricus bisporus. Appl. Environ. Microbiol. 67:4316–4323.

14. Hahn, M. W. 2003. Isolation of strains belonging to the cosmopolitan Polynucleobacter necessarius cluster from freshwater habitats located in three climatic zones. Appl. Environ. Microbiol. 69:5248–5254.